Blue Brain Project Update

Here at Technology Report we recognize that a conscious computer is likely to 1. happen within decades and 2. bring the most profound transformation of humanity in the history of … humanity.    Two of the major projects working towards the goal of a general artificial intelligence are DARPA SYNAPSE and BLUE BRAIN.   DARPA’s funding is much higher but they are newer and approaching the problem more along the lines of *computer programming* rather than *reverse engineering*.     Blue Brain’s approach is more along the lines of copying the observed neural structure of the human brain and creating a computer simulation based on those observations and activity.    Here, from their website, is a progress report on Blue Brain:

The Blue Brain Project plans to reverse engineer the human brain as a supercomputer simulation.

The project was founded in May 2005 by Henry Markram at the EPFL in Switzerland and has made notable progress in its first decade.

As of August 2012 the largest simulations are of mesocircuits containing around 100 cortical columns (image above right). Such simulations involve approximately 1 million neurons and 1 billion synapses. This is about the same scale as that of a honey bee brain. It is hoped that a rat brain neocortical simulation (~21 million neurons) will be achieved by the end of 2014. A full human brain simulation (86 billion neurons) should be possible by 2023 provided sufficient funding is received.

Latest news

July 9, 2012  – The FET Flagship Pilots final conference took place in Brussels today. Results of the recently-completed one-year pilot phase of the Human Brain Project (HBP) were presented. See the 108-page HBP report, as well as the conference statement by EC vice-president Neelie Kroes. During autumn 2012 the EU will consider the HBP and five other candidate science projects. In February 2013 a decision will be made on which of the two candidates will each receive €1 billion in funding over ten years. The chosen two projects will then run from 2013 to 2023. If the HBP is chosen, the Blue Brain Project will become a central part of it.
Jun 20, 2012  – Two newly published video talks which share lots of detail about the Blue Brain Project simulations and visualisations. The talks were given at the INCF Multiscale Modeling Program Workshop in Stockholm on May 31 and June 1, 2012.

Jun 11, 2012  – Scientific American has published a featured article by Henry Markram. Available online behind a $6 paywall: A countdown to a digital simulation of every last neuron in the human brain. See also the associated video animation: Neuron to cortical column.
May 24, 2012  – New video of Henry Markram talking about the Blue Brain Project. Includes Markram’s thoughts on consciousness, autism, and the Human Brain Project. Recorded in Barcelona on May 22, 2012.
Mar 30, 2012  – The ETH Board has requested CHF 85 million (€70 m) from the Swiss government to fund the Blue Brain Project during 2013 to 2016.
Jan 3, 2012  – FET Flagships mid-term conference presentation is now available online: Introducing the Human Brain Project

Blue Brain Project Progress …

BLUE BRAIN – the search for strong artificial intelligence.    Creating a mechanized “copy” of brain function.

For me it’s one of the world’s most significant and intriguing science projects along with DARPA SyNAPSE which is also working towards strong AI but in a very different way.

Using an IBM Blue Gene Supercomputer, Blue Brain is working to create a simulation of many of the interactions in the Neocortex of the brain (think “where we think”).   Progress after a few years of the project seems pretty steady although DARPA SyNAPSE has been a lot more money lately as it dips into the massive resources of the US military.

SyNAPSE Chip: “Someday, you’ll work for ME!”

SyNAPSE Project Chip

SyNAPSE Project AI Neuromorphic Chip

IBM’s Aug 18th Press Release announced another significant milestone for the DARPA SyNAPSE project, the world’s best funded and arguably the “most likely to succeed” approach to creating a general artificial intelligence.

The release notes that the new chips represent a departure from traditional models of computing:

…. cognitive computers are expected to learn through experiences, find correlations, create hypotheses, and remember – and learn from – the outcomes, mimicking the brains structural and synaptic plasticity.

To do this, IBM is combining principles from nanoscience, neuroscience and supercomputing as part of a multi-year cognitive computing initiative. The company and its university collaborators also announced they have been awarded approximately $21 million in new funding from the Defense Advanced Research Projects Agency (DARPA) for Phase 2 of the Systems of Neuromorphic Adaptive Plastic Scalable Electronics (SyNAPSE) project.

As we’ve noted here many times, another remarkable project is the Blue Brain Project in Europe spearheaded by Dr. Henry Markram.     That team has joined with many others and is in the process of applying to the European Union for substantial funding – perhaps as much as 1.6 billion dollars.    Although Blue Brain tends to shy away from stating that their objective is a general artificial intelligence,  I would argue that they should have that goal and also that they are much more likely to be funded by stating that goal in no uncertain terms.

Unfortunately there remain many both in and outside of technology circles who believe the search for a general artificial intelligence is either dangerous or a waste of time and money.   Both these scenarios are possible but unlikely.   Sure, intelligence can be dangerous but given human history compared to technology history it seems odd to argue that we are more likely to create a Frankenstein than a helpful machine process.    Computers don’t kill people, people kill people.

In terms of a waste of time and money, clearly we humans have overrated our intelligence for some time – probably since the beginning of self-awareness.   There are few rational reasons to reject the idea that we cannot duplicate processes that are similar to our own thinking in a machine.   The advantages of machine based intelligence are likely to be  substantial – probably on the order of a new human age with vastly improved resource efficiency, poverty reduction, and more.  Thus the costs – currently measured in the low tens of millions – pale in comparison to almost all other government projects – many with massively dubious and negative ROIs.

IBM’s Artificial Intelligence – is the cat brain out of the bag or not?

We’ve profiled two of the world’s most promising AI efforts here at Technology Report.     Blue Brain in Switzerland and DARPA SyNAPSE here in the USA, a newer project that appears to be getting better funding thanks to backing from the US Defense Department.   Both of these projects rely on IBM supercomputers for their simulations of neurons and their interactions, and both are optimistic about the potential to develop thinking machines within the next decade.

The project leader of Blue Brain, Dr. Henry Markram, has been very vocal and very critical of claims by  the IBM team leader Dr. Dharmendra S. Modha.    Markram’s concerns are expressed here in his Technology Report guest post about the IBM project claims.

We asked Dr. Modha for a response but didn’t hear back, so I’d like to refer folks to the Modha blog here, especially to the post called ‘The Cat is Out of the bag and BlueMatter”, which details progress in the SyNAPSE project and explains the claims made that they are simulating brain activity that is roughly equivalent to that we’d see from a cat.  Here’s an excerpt from that post:

Towards this end, we are announcing two major milestones.

First, using Dawn Blue Gene / P supercomputer at Lawrence Livermore National Lab with 147,456 processors and 144 TB of main memory, we achieved a simulation with 1 billion spiking neurons and 10 trillion individual learning synapses. This is equivalent to 1,000 cognitive computing chips each with 1 million neurons and 10 billion synapses, and exceeds the scale of cat cerebral cortex. The simulation ran 100 to 1,000 times slower than real-time.

Second, we have developed a new algorithm, BlueMatter, that exploits the Blue Gene supercomputing architecture to noninvasively measure and map the connections between all cortical and sub-cortical locations within the human brain using magnetic resonance diffusion weighted imaging. Mapping the wiring diagram of the brain is crucial to untangling its vast communication network and understanding how it represents and processes information.

Finally, here is an excellent presentation by Dr. Modha that outlines in simple terms what they are trying to do with DARPA SyNAPSE, which is build a human scale brain by 2018.

Neuroscience Expert Dr. Henry Markram on the IBM “Cat Brain” Simulation: “IBM’s claim is a HOAX”

Editors Note:   We’re hoping for more information from Dr. Modha who is also welcome to a Guest post here at Technology Report.

——   Guest Post by Dr. Henry Markram of the Blue Brain Project —-

IBM’s claim is a HOAX.

This is a mega public relations stunt – a clear case of scientific deception of the public. These simulations do not even come close to the complexity of an ant, let alone that of a cat. IBM allows Mohda to mislead the public into believing that they have simulated a brain with the complexity of a cat – sheer nonsense.

Here are the scientific reasons why this is a hoax and misleading PR stunt:

How complex is their model?
They claim to have simulated over a billion neurons interacting. Their so called “neurons” are the tiniest of points you can imagine, a microscopic dot. Over 98% of the volume of a neuron is branches (like a tree). They just cut off all the branches and roots and took a point in the middle of the trunk to represent a entire neuron. In real life, each segment of the branches of a neuron contains dozens of ion channels that powerfully controls the information processing in a neuron. They have none of that. Neurons contain 10’s of thousands of proteins that form a network with 10’s of millions of interactions. These interactions are incredibly complex and will require solving millions of differential equations. They have none of that. Neurons contain around 20’000 genes that produce products called mRNA, which builds the proteins. The way neurons build proteins and transport them to all the corners of the neuron where they are needed is an even more complex process which also controls what a neuron is, its memories and how it will process information. They have none of that. They use an alpha function (up fast down slow) to simulate a synaptic event. This is a completely inaccurate representation of a synapse. There are at least 6 types of synapses that are highly non-linear in their transmission (i.e. that transform inputs and not only transmit inputs). In fact you would need a 10’s of thousands of differential equations to simulate one synapse. Synapses are also extremely complex molecular machines that would themselves require thousands of differential equations to simulate just one. They simulated none of this. There are complex differential equations that must be solved to simulate the ionic flow in the branches, to simulate the ion channels biophysics, the protein-protein interactions, as well as the complete biochemical and genetic machinery as well as the synaptic transmission between neurons. 100’s of thousands of more differential equations. They have none of this. Then there are glia – 10 times more than neurons..And the blood supply…and more and more. These “points” they simulated and the synapses that they use for communication are literally millions of times simpler than a real cat brain. So they have not even simulated a cat’s brain at more than one millionth of it’s complexity.

Is it nonetheless the biggest point neuron simulation ever run?
No. These people simulated 1 billion points interacting. They used a formulation to model the summing up and threshold spiking of the “points” called the Izhikevik Formulation (an extremely simple equation). Eugene Izhikevik himself already in 2005 ran a simulation with 100 billion such points interacting just for the fun of it: (over 60 times larger than Modha’s simulation). This simulation ran on a cluster of desktop PCs and which every graduate student can run This is no technical achievement and certainly not even a record number of point neurons. That model exhibited oscillations, but that always happens so even simulating 100 Billion such points interacting is light years away from a brain.

Is the simulator they built a big step?
Not even close. There are numerous proprietary and peer-reviewed neurosimulators (e.g., NCS, pNEURON, SPLIT, NEST) out there that can handle very large parallel models that are essentially only bound by the available memory. The bigger the machine you have available, the more neurons you can simulate. All these simulators apply optimizations for the particular platform in order to make optimal use of the available hardware. Without any comparison to existing simulators, their publication is a non-peer reviewed claim.

Did they learn anything about the brain?
They got very excited because they saw oscillations. Oscillations are an obligatory artifact that one always gets when many points interact. These findings that they claim on the neuroscience side may excite engineers, but not neuroscientists.

Why did they get the Gordon Bell Prize?
They submitted a non-peer reviewed paper to the Gordon Bell Committee and were awarded the prize almost instantly after they made their press release. They seem to have been very successful in influencing the committee with their claim, which technically is not peer-reviewed by the respective community and is neuroscientifically outrageous.

But is there any innovation here?
The only innovation here is that IBM has built a large supercomputer – which is irrelevant to the press release.

Why did IBM let Mohda make such a deceptive claim to the public?
I don’t know. Perhaps this is a publicity stunt to promote their supercompter. The supercomputer industry is suffering from the financial crisis and they probably are desperate to boost their sales. It is so disappointing to see this truly great company allow the deception of the public on such a grand scale.

But have you not said you can simulate the Human brain in 10 years?
I am a biologist and neuroscientist that has studied the brain for 30 years.  I know how complex it is. I believe that with the right resources and the right strategy it is possible. We have so far only simulated a small part of the brain at the cellular level of a rodent and I have always been clear about that.

Would other neuroscientists agree with you?
There is no neuroscientist on earth that would agree that they came even close to simulating the cat’s brain – or any brain.

But did Mohda not collaborate with neuroscientists?
I would be very surprised if any neuroscientists that he may have had in his DARPA consortium realized he was going to make such an outrages claim. I can’t imagine that that the San Fransisco neuroscientists knew he was going to make such a stupid claim. Modha himself is a software engineer with no knowledge of the brain.

But did you not collaborate with IBM?
I was collaborating with IBM on the Blue Brain Project at the very beginning because they had the best available technology to faithfully allow us to integrate the diversity and complexity found in brain tissue into a model. This for me is a major endeavor to advance our insights into the brain and drug development. Two years ago, when the same Dharmendra Mhoda claimed the “mouse-scale simulations”, I cut all neuroscience collaboration with IBM because this is an unethical claim and it deceives the public.

What IBM allowed Modha to do here is not only wrong, but outrageous. They deceived millions of people.

Henry Markram
Blue Brain Project

IBM / DARPA SyNAPSE announce new brain simulation at Supercomputing Conference

Update:  The reports of  this breakthrough at a ‘cat brain’ level may be quite misleading or exaggerated.  I’m in contact with Henry Markram, a leading brain researcher spearheading the “Blue Brain” simulation in France, and waiting for his permission to post his concerns about the claims from IBM researchers.

At the Supercomputing Conference SC09 in Portland Oregon IBM has announced a spectacular advance in our ability to mechanically simulate cognitive activity with machines – they have developed a brain simulation that approximates a cat brain in complexity.

We have profiled the SyNAPSE project here at Technology Report thanks to a guest post by one of those working there. This new development is a remarkable advance given that SyNAPSE has been going strong for under one year. With a cat brain complexity under its belt it appears only a matter of a few more years before the project is likely to have modeled interactions at the scale of human brain complexity.

The most provocative idea about brain modelling is that these models will at some point attain human-like consciousness along with the ability to communicate with humans and (hopefully) cooperate with us in problem solving. No longer just a science fiction topic, this potential “explosion of intelligence” relates to one of the hottest topics in technology – the Singularity.

More on the IBM Blue Matter project from:

Popular Mechanics

SyNapse and Blue Brain Projects Update

As noted before I think the two most promising “Artificial Intelligence” projects are Blue Brain and DARPA SyNAPSE and I’m happy to see in this Boston blog “Neurdon” by some of the SyNAPSE project folks a few of the DARPA bucks going to elaborate on some of the technical goals of the SyNAPSE project:

SyNAPSE seeks not just to build brain-like chips, but to define a fundamentally distinct form of computational device. These new devices will excel at the kinds of distributed, data-intensive algorithms that complex, real-world environment require…

It’s very exciting stuff this “build a brain” competition.  Although I think the theoretical approach taken by Blue Brain is more consistent with what little we know about how brains work, I’d guess SyNAPSE’s access to DARPA funding will give it the long term edge in terms of delivering a functional thinking machine in the 15-20 year time frame most artificial intelligence researches believe we’ll need for that ambitious goal.

My optimism is greater than many because I think humans have rather dramatically exaggerated the complexity of their own feeble mental abilities by a quite a … bit, and I’d continue to argue that consciousness is much more a function of quantity than quality.

Another promising development in the artificial brain area is in Spain where  Blue Brain project partner universities are working on the project:  Cajal Blue Brain

Blue Brain Project – IBM has not withdrawn support.

The Blue Brain project represents the most promising effort to date to reverse engineer a human brain. In phase one of this project, completed last year, the team has modelled a rat neocortical column using an IBM Blue Gene supercomputer. Contrary to popular misconceptions there is little reason to believe that a human brain differs all that dramatically from that of many other animals. Many scientists now believe that the most significant difference between human and other animal brains is mainly the larger number of interconnections via a denser brain neocortex region. Surprisingly, the neocortex is a hugely redundant structure where billions of neurons are densely packed into interconnected neocortical columns.

Although it is not the stated goal of the project which is designed primarily to help understand the brain and diagnose brain disorders, the Blue Brain project may be the first to deliver a true “Artificial Intelligence” via this process of reverse engineering.

Thankfully the recent rumor reporting a problem between IBM and the Blue Brain project appears to be false. Technology Report has confirmed with IBM Switzerland that the Blue Brain project is waiting for Phase II funding from the Swiss Government. See the statement from Blue Brain project director Henry Markam below.

A recent intriguing development with Gamma oscillations and the Blue Brain AI simulation is reported here at Neuronism.

Henry Markram, Project Director as quoted by IBM Switzerland to Technology Report on January 19, 2009:

The funding:
There is a serious misconception that IBM somehow funded or donated to
support the Blue Brain Project. The BBP project is funded primarily by the
Swiss government and secondarily by grants and some donations from private
individuals. The EPFL bought the BG, it was not donated to the EPFL. It was
at a reduced cost because at that stage it was still a prototype and IBM
was interested in exploring how different applications will perform on the
machine – we were a kind of beta site.

The Collaboration:
The Blue Brain Project is a project that I conceived over the past 15
years. I chose the name because of the Blue Gene series which is a
fantastic architecture for brain simulations. When we bought the BG, we
also had to make sure that we have the computer engineering and computer
science expertise to run the machine and optimize all the programs. So BG
came to us with IBM’s full support as a technology partner. This component
of the collaboration is invaluable to the Project and will continue and
grow as long as we have a Blue Gene or other architectures from IBM. This
is by far the major component of the collaboration.

IBM Research at T.J. Watson, also contributed a postdoc that was sent to
work with us at the EPFL and assigned a researcher at Watson to work on
some computational neuroscience tasks. The research and term assigned to
these postdocs is done, a success and published. Actually, the term expired
almost a year ago, and the IBM postdoc, Sean Hill, actually transfered and
is now an employee of the BBP and not IBM. The researcher at TJ Watson
worked on a specific problem of collision detection between the axons and
dendrites and this is done very well and already published. Although very
important projects and contributions, this is a small part of the BBP which
is carried out at the EPFL and involves, neuroscience, neuroinformatics,
vizualization, and a vast spectrum of computational neuroscience.

BBP needs BG’s to continue the project. The architecture is perfect for
brain simulations. When we manage to get our funding to buy the next BG/P
finalized, we will start Phase 2 and that will of course involve the basic
(and most significant) technology collaboration, and most likely also many
new collaborations on specific research targeted topics where we see that
IBM can, and would like to, contribute. So this is an intermediate phase
while we get ready for phase 2 – molecular level modeling.

BBP sees IBM as a key partner in the BBP and I do think that IBM also sees
the value in the BBP. We are getting ready for Phase 2, but it has not
started until we get the next BG series.

More about Blue Brain is here